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Tag Archives: bioinformatics
Systems Biology and Biomarkers in Neuropsychiatry
Neuropsychiatric (NP) disorders such as autism spectrum disorders (ASD) are the leading causes of disability around the world. However, because of their complexity, the etiology and pathophysiology of NP diseases are still mostly unknown. Such complexity may be caused by … Continue reading
Systems Biomarkers and Skin Diseases
With the development of systems biology, bioinformatics, ‘omics’ studies, more and more discoveries are made in the disorders including cardiovascular diseases and cancer. However, although sometimes ignored, other common illnesses with high incidences including skin diseases also need more assessments … Continue reading
Posted in Systems Biology
Tagged bioinformatics, biomarkers, computational, microarray, networks, omics, psoriasis, skin, Systems Biology, transcriptional
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The Database of Biological Rhythms (DBBR)
The Database of Biological Rhythms (DBBR) The Chronobiology Portal: Chronobiology, Chronotherapy, Circadian Rhythms, and More Journals about Biological Rhythms and Chronobiology Biological Rhythm Research Chronobiology International Journal of Biological Rhythms Journal of Chronotherapy and Drug Delivery Journal of Circadian … Continue reading
Posted in Bioinformatics, Chronobiology
Tagged bioinformatics, biological rhythms, Cancer, cardiovascular disease, chronobiology, chronotherapy, circadian, Circadian Rhythm, Database, Depression, genes, heart, heart disease, inflammation, inflammatory, major depression disorder (MDD), rhythms, tumor
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Bioinformatics Databases and Tools for the Discovery of Proteomic and Pathway Biomarkers
BioLayout (http://www.biolayout.org/) Feature: “For the visualization and analysis of network graphs” Cytoscape (http://www.cytoscape.org/) Feature: “Network visualization” E-Cell (http://www.e-cell.org/) Feature: Computational models GelBank (http://gelbank.anl.gov/) Feature: “comparison of 2DE patterns in the context of proteome sequence queries” Gene Ontology (http://www.geneontology.org/) Feature: “Standardizing … Continue reading
Posted in Bioinformatics, Biomarkers, Systems Biology
Tagged bioinformatics, biomarker, biomarkers, cells, Database, databases, interaction, maps, network, pathway, proteome, proteomics, tools
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Bioinformatics Resources for MicroRNA (miRNA) Studies and Biomarker Discovery
CircuitsDB (http://biocluster.di.unito.it/circuits/) Feature: “MicroRNA / Transcription Factor Regulatory Circuits in Human and Mouse” deepBase (http://deepbase.sysu.edu.cn/) Feature: “For annotating and discovering small and long ncRNAs” Gene Expression Omnibus database (http://www.ncbi.nlm.nih.gov/geo/) Feature: “The miRNA expression profile” HOCTARdb (http://hoctar.tigem.it/) Feature: “microRNA target prediction” … Continue reading
Posted in Bioinformatics, Biomarkers, MicroRNA
Tagged bioinformatics, biomarkers, Database, databases, MicroRNA, miRNA, resources, RNA, sites, tools, websites
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Neuroinformatics: An Introduction
Neuroinformatics: An Introduction The challenges in neuroinformatics Challenges in making neuroinformatics databases and tools (Morse, 2008) The variety in spatial scales Various data types Traditional bioinformatics concentrates on Genomic and proteomic data Sequences (DNA, RNA, and protein molecules) Development … Continue reading
Posted in Bioinformatics, Brain, Nervous System, Neuroinformatics
Tagged bioinformatics, brain, brain diseases, Cognition, databases, Electroencephalography (EEG), Functional magnetic resonance imaging (fMRI), gene expression, Genomics, Magnetoencephalography (MEG), medical informatics, nervous system, Neuroanatomy, neuroinformatics, Neurological disorders, phenotype, phenotypic, positron emission tomography, proteomics, software, tools
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